HL_3T1H_026

3D structure

PDB id

3T1H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a human anti-codon stem loop (HASL) of transfer RNA lysine 3 (tRNALys3) bound to an mRNA with an AAA-codon in the A-site and Paromomycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.11 Å

Loop

Sequence

CGGUUCGGCCG

Length

11 nucleotides

Bulged bases

3T1H|1|A|U|1118, 3T1H|1|A|C|1119

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3T1H|1|A|C|1114
3T1H|1|A|G|1115
3T1H|1|A|G|1116
3T1H|1|A|U|1117
3T1H|1|A|U|1118
3T1H|1|A|C|1119
3T1H|1|A|G|1120
3T1H|1|A|G|1121
3T1H|1|A|C|1122
3T1H|1|A|C|1123
3T1H|1|A|G|1124

Current chains

Chain A

16s rRNA

Nearby chains

Chain I

30S ribosomal protein S9