HL_3TS2_001
3D structure
- PDB id
- 3TS2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mouse Lin28A in complex with let-7g microRNA pre-element
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.01 Å
Loop
- Sequence
- UCUAUGAUACCA
- Length
- 12 nucleotides
- Bulged bases (A, C, G, U)
- 9U, 10G, 11A, 12U
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_55305.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
3TS2|1|U|U|5
3TS2|1|U|C|6
3TS2|1|U|U|7
3TS2|1|U|A|8
3TS2|1|U|U|9
3TS2|1|U|G|10
3TS2|1|U|A|11
3TS2|1|U|U|12
3TS2|1|U|A|13
3TS2|1|U|C|14
3TS2|1|U|C|15
3TS2|1|U|A|16
Current chains
- Chain U
- RNA (5'-R(*GP*GP*GP*GP*UP*CP*UP*AP*UP*GP*AP*UP*AP*CP*CP*AP*CP*CP*CP*CP*GP*GP*AP*G)-3')
Nearby chains
- Chain A
- Protein lin-28 homolog A
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