HL_3U5F_023

3D structure

PDB id

3U5F (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of the eukaryotic ribosome at 3.0 A resolution. This entry contains ribosomal RNA and ions of the 40S subunit, ribosome B

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GAUCAGAUACC

Length

11 nucleotides

Bulged bases

3U5F|1|6|U|1004

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_46175.6

Basepair signature

cWW-R-tSH-R-R-R-R

Number of instances in this motif group

17

Unit IDs

3U5F|1|6|G|997
3U5F|1|6|A|998
3U5F|1|6|U|999
3U5F|1|6|C|1000
3U5F|1|6|A|1001
3U5F|1|6|G|1002
3U5F|1|6|A|1003
3U5F|1|6|U|1004
3U5F|1|6|A|1005
3U5F|1|6|C|1006
3U5F|1|6|C|1007

Current chains

Chain 6

18S rRNA

Nearby chains