HL_3U5F_024

3D structure

PDB id

3U5F (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of the eukaryotic ribosome at 3.0 A resolution. This entry contains ribosomal RNA and ions of the 40S subunit, ribosome B

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UUUUUUAAUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_55272.1

Basepair signature

cWW-cWW-L-R-cSS-cWW

Number of instances in this motif group

1

Unit IDs

3U5F|1|6|U|1055
3U5F|1|6|U|1056
3U5F|1|6|U|1057
3U5F|1|6|U|1058
3U5F|1|6|U|1059
3U5F|1|6|U|1060
3U5F|1|6|A|1061
3U5F|1|6|A|1062
3U5F|1|6|U|1063
3U5F|1|6|G|1064

Current chains

Chain 6

18S rRNA

Nearby chains