HL_3UCU_001
3D structure
- PDB id
- 3UCU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The c-di-GMP-I riboswitch bound to pGpG
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
Loop
- Sequence
- CGAAAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3UCU_001 not in the Motif Atlas
- Geometric match to HL_3MXH_001
- Geometric discrepancy: 0.0534
- The information below is about HL_3MXH_001
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.6
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 434
Unit IDs
3UCU|1|R|C|31
3UCU|1|R|G|32
3UCU|1|R|A|33
3UCU|1|R|A|34
3UCU|1|R|A|35
3UCU|1|R|G|36
Current chains
- Chain R
- RNA (92-MER)
Nearby chains
- Chain P
- U1 small nuclear ribonucleoprotein A
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