HL_4AQ7_004
3D structure
- PDB id
- 4AQ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of E. coli leucyl-tRNA synthetase, tRNA(leu) and leucyl-adenylate analogue in the aminoacylation conformation
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.5 Å
Loop
- Sequence
- GGAAUCGGUAGAC
- Length
- 13 nucleotides
- Bulged bases
- 4AQ7|1|E|U|16, 4AQ7|1|E|C|17, 4AQ7|1|E|G|18, 4AQ7|1|E|G|19, 4AQ7|1|E|U|20
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4AQ7_004 not in the Motif Atlas
- Homologous match to HL_3ZGZ_001
- Geometric discrepancy: 0.0534
- The information below is about HL_3ZGZ_001
- Detailed Annotation
- tRNA D-loop
- Broad Annotation
- No text annotation
- Motif group
- HL_68767.1
- Basepair signature
- cWW-cWS-tSH-cWS-F
- Number of instances in this motif group
- 3
Unit IDs
4AQ7|1|E|G|12
4AQ7|1|E|G|13
4AQ7|1|E|A|14
4AQ7|1|E|A|15
4AQ7|1|E|U|16
4AQ7|1|E|C|17
4AQ7|1|E|G|18
4AQ7|1|E|G|19
4AQ7|1|E|U|20
4AQ7|1|E|A|20|||A
4AQ7|1|E|G|21
4AQ7|1|E|A|22
4AQ7|1|E|C|23
Current chains
- Chain E
- E. COLI TRNALEU UAA ISOACCEPTOR
Nearby chains
- Chain D
- LEUCINE--TRNA LIGASE
Coloring options: