HL_4AS1_004
3D structure
- PDB id
- 4AS1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of E. coli leucyl-tRNA synthetase, tRNA(leu) and the benzoxaborole AN2679 in the editing conformation
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.02 Å
Loop
- Sequence
- GUUCAAGUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4AS1_004 not in the Motif Atlas
- Homologous match to HL_4RDX_003
- Geometric discrepancy: 0.0802
- The information below is about HL_4RDX_003
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33597.3
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 135
Unit IDs
4AS1|1|B|G|53
4AS1|1|B|U|54
4AS1|1|B|U|55
4AS1|1|B|C|56
4AS1|1|B|A|57
4AS1|1|B|A|58
4AS1|1|B|G|59
4AS1|1|B|U|60
4AS1|1|B|C|61
Current chains
- Chain B
- TRNA-LEU5 (UAA ISOACEPTOR)
Nearby chains
- Chain A
- LEUCINE--TRNA LIGASE
Coloring options: