HL_4B3S_035

3D structure

PDB id

4B3S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the 30S ribosome in complex with compound 37

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

GGUCUCC

Length

7 nucleotides

Bulged bases

4B3S|1|A|U|839, 4B3S|1|A|U|841

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4B3S_035 not in the Motif Atlas

Geometric match to HL_2ZZM_002

Geometric discrepancy: 0.3241

The information below is about HL_2ZZM_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.3

Basepair signature

cWW-F-F

Number of instances in this motif group

4

Unit IDs

4B3S|1|A|G|837
4B3S|1|A|G|838
4B3S|1|A|U|839
4B3S|1|A|C|840
4B3S|1|A|U|841
4B3S|1|A|C|848
4B3S|1|A|C|849

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains

Chain B

30S RIBOSOMAL PROTEIN S2

Chain R

30S RIBOSOMAL PROTEIN S18