HL_4BPP_023

3D structure

PDB id

4BPP (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the eukaryotic 40S ribosomal subunit in complex with eIF1 and eIF1A - Complex 4

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

AAUAAAUGU

Length

9 nucleotides

Bulged bases

4BPP|1|A|A|1033, 4BPP|1|A|U|1036

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75624.1

Basepair signature

cWW-cWW-cWH-R

Number of instances in this motif group

1

Unit IDs

4BPP|1|A|A|1030
4BPP|1|A|A|1031
4BPP|1|A|U|1032
4BPP|1|A|A|1033
4BPP|1|A|A|1034
4BPP|1|A|A|1035
4BPP|1|A|U|1036
4BPP|1|A|G|1037
4BPP|1|A|U|1038

Current chains

Chain A

18S RRNA

Nearby chains

Chain 3

40S RIBOSOMAL PROTEIN RPS7E

Chain 4

40S RIBOSOMAL PROTEIN S3A

Chain 6

40S RIBOSOMAL PROTEIN S27

Chain B

40S RIBOSOMAL PROTEIN SA