HL_4BTS_005

3D structure

PDB id

4BTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

AGCAAU

Length

6 nucleotides

Bulged bases

4BTS|1|AA|C|228

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4BTS_005 not in the Motif Atlas

Geometric match to HL_5U3G_001

Geometric discrepancy: 0.3596

The information below is about HL_5U3G_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

4BTS|1|AA|A|226
4BTS|1|AA|G|227
4BTS|1|AA|C|228
4BTS|1|AA|A|229
4BTS|1|AA|A|230
4BTS|1|AA|U|231

Current chains

Chain AA

18S ribosomal RNA

Nearby chains