HL_4BTS_017

3D structure

PDB id

4BTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

UGUUCCAGG

Length

9 nucleotides

Bulged bases

4BTS|1|AA|G|749

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4BTS_017 not in the Motif Atlas

Homologous match to HL_4V88_203

Geometric discrepancy: 0.2046

The information below is about HL_4V88_203

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_47383.2

Basepair signature

cWW-F-F-cWW-F-F

Number of instances in this motif group

11

Unit IDs

4BTS|1|AA|U|748
4BTS|1|AA|G|749
4BTS|1|AA|U|750
4BTS|1|AA|U|751
4BTS|1|AA|C|752
4BTS|1|AA|C|753
4BTS|1|AA|A|754
4BTS|1|AA|G|755
4BTS|1|AA|G|756

Current chains

Chain AA

18S ribosomal RNA

Nearby chains

Chain AD

40S RIBOSOMAL PROTEIN RPS9E

Chain AP

40S RIBOSOMAL PROTEIN S24

Chain AW

40S RIBOSOMAL PROTEIN RPS4E