HL_4BTS_021

3D structure

PDB id

4BTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4BTS_021 not in the Motif Atlas

Homologous match to HL_4V88_207

Geometric discrepancy: 0.0793

The information below is about HL_4V88_207

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

4BTS|1|AA|C|915
4BTS|1|AA|G|916
4BTS|1|AA|A|917
4BTS|1|AA|A|918
4BTS|1|AA|A|919
4BTS|1|AA|G|920

Current chains

Chain AA

18S ribosomal RNA

Nearby chains

Chain A5

40S RIBOSOMAL PROTEIN RPS26E

Chain AO

40S RIBOSOMAL PROTEIN RPS13E