HL_4BTS_077

3D structure

PDB id

4BTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

CCUGCG

Length

6 nucleotides

Bulged bases

4BTS|1|CA|C|189

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4BTS_077 not in the Motif Atlas

Geometric match to HL_1NBS_006

Geometric discrepancy: 0.2841

The information below is about HL_1NBS_006

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

4BTS|1|CA|C|185
4BTS|1|CA|C|186
4BTS|1|CA|U|187
4BTS|1|CA|G|188
4BTS|1|CA|C|189
4BTS|1|CA|G|190

Current chains

Chain CA

18S ribosomal RNA

Nearby chains

Chain C2

40S RIBOSOMAL PROTEIN S8