HL_4BTS_142

3D structure

PDB id

4BTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

UUUGGAAUUGUG

Length

12 nucleotides

Bulged bases

4BTS|1|DA|G|1531

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_40871.1

Basepair signature

cWW-cWH-tWH-R-R-R

Number of instances in this motif group

8

Unit IDs

4BTS|1|DA|U|1522
4BTS|1|DA|U|1523
4BTS|1|DA|U|1524
4BTS|1|DA|G|1525
4BTS|1|DA|G|1526
4BTS|1|DA|A|1527
4BTS|1|DA|A|1528
4BTS|1|DA|U|1529
4BTS|1|DA|U|1530
4BTS|1|DA|G|1531
4BTS|1|DA|U|1532
4BTS|1|DA|G|1533

Current chains

Chain DA

18S ribosomal RNA

Nearby chains

Chain DM

40S RIBOSOMAL PROTEIN RPS18E

Chain DN

40S RIBOSOMAL PROTEIN RPS29E

Chain DS

40S RIBOSOMAL PROTEIN RPS15E

Chain DT

40S RIBOSOMAL PROTEIN RPS19E