HL_4D61_041
3D structure
- PDB id
- 4D61 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of ribosomal 80S complexes with termination factors and cricket paralysis virus IRES reveal the IRES in the translocated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9 Å
Loop
- Sequence
- ACGAUCAGAUACCGU
- Length
- 15 nucleotides
- Bulged bases
- 4D61|1|1|U|1061
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4D61|1|1|A|1052
4D61|1|1|C|1053
4D61|1|1|G|1054
4D61|1|1|A|1055
4D61|1|1|U|1056
4D61|1|1|C|1057
4D61|1|1|A|1058
4D61|1|1|G|1059
4D61|1|1|A|1060
4D61|1|1|U|1061
4D61|1|1|A|1062
4D61|1|1|C|1063
4D61|1|1|C|1064
4D61|1|1|G|1065
4D61|1|1|U|1066
Current chains
- Chain 1
- 18S RRNA
Nearby chains
- Chain O
- 40S RIBOSOMAL PROTEIN S14
- Chain j
- Cripavirus internal ribosome entry site (IRES); CrPV IRES
Coloring options: