HL_4DR2_005

3D structure

PDB id

4DR2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with multiple copies of paromomycin molecules bound

Experimental method

X-RAY DIFFRACTION

Resolution

3.25 Å

Loop

Sequence

CUUUG

Length

5 nucleotides

Bulged bases

4DR2|1|A|U|202, 4DR2|1|A|U|204

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4DR2_005 not in the Motif Atlas

Homologous match to HL_4LFB_005

Geometric discrepancy: 0.1183

The information below is about HL_4LFB_005

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_48778.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

4DR2|1|A|C|201
4DR2|1|A|U|202
4DR2|1|A|U|203
4DR2|1|A|U|204
4DR2|1|A|G|216

Current chains

Chain A

16S rRNA

Nearby chains