HL_4DV7_010

3D structure

PDB id

4DV7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, A915G, bound with streptomycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.29 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4DV7_010 not in the Motif Atlas

Homologous match to HL_4LFB_010

Geometric discrepancy: 0.0999

The information below is about HL_4LFB_010

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.3

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

397

Unit IDs

4DV7|1|A|C|379
4DV7|1|A|G|380
4DV7|1|A|C|381
4DV7|1|A|A|382
4DV7|1|A|A|383
4DV7|1|A|G|384

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

ribosomal protein S16