HL_4FAQ_007

3D structure

PDB id

4FAQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Ca2+ and 5'-exon

Experimental method

X-RAY DIFFRACTION

Resolution

3.11 Å

Loop

Sequence

CUGUUCGCAG

Length

10 nucleotides

Bulged bases

4FAQ|1|A|U|309, 4FAQ|1|A|C|310, 4FAQ|1|A|G|311

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4FAQ|1|A|C|305
4FAQ|1|A|U|306
4FAQ|1|A|G|307
4FAQ|1|A|U|308
4FAQ|1|A|U|309
4FAQ|1|A|C|310
4FAQ|1|A|G|311
4FAQ|1|A|C|312
4FAQ|1|A|A|313
4FAQ|1|A|G|314

Current chains

Chain A

Group IIC intron

Nearby chains