HL_4GCW_004
3D structure
- PDB id
- 4GCW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of RNase Z in complex with precursor tRNA(Thr)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GUUCGAGCC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33239.15
- Basepair signature
- cWW-R-R-tWH-R-R-R
- Number of instances in this motif group
- 108
Unit IDs
4GCW|1|B|G|53||||2_556
4GCW|1|B|U|54||||2_556
4GCW|1|B|U|55||||2_556
4GCW|1|B|C|56||||2_556
4GCW|1|B|G|57||||2_556
4GCW|1|B|A|58||||2_556
4GCW|1|B|G|59||||2_556
4GCW|1|B|C|60||||2_556
4GCW|1|B|C|61||||2_556
Current chains
- Chain B
- TRNA(THR)
Nearby chains
- Chain A
- Ribonuclease Z
Coloring options: