HL_4GMA_005

3D structure

PDB id

4GMA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the adenosylcobalamin riboswitch

Experimental method

X-RAY DIFFRACTION

Resolution

3.94 Å

Loop

Sequence

UCGGGGGGA

Length

9 nucleotides

Bulged bases

4GMA|1|Z|G|199

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71636.1

Basepair signature

cWW-R-R-R-R-R

Number of instances in this motif group

1

Unit IDs

4GMA|1|Z|U|193
4GMA|1|Z|C|194
4GMA|1|Z|G|195
4GMA|1|Z|G|196
4GMA|1|Z|G|197
4GMA|1|Z|G|198
4GMA|1|Z|G|199
4GMA|1|Z|G|200
4GMA|1|Z|A|201

Current chains

Chain Z

Adenosylcobalamin riboswitch

Nearby chains