HL_4JGN_001

3D structure

PDB id

4JGN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of RNA silencing suppressor p19 with 1nt-5'-overhanging double-helical RNA 20mer pUUG(CUG)5CU

Experimental method

X-RAY DIFFRACTION

Resolution

1.86 Å

Loop

Sequence

CUUUG

Length

5 nucleotides

Bulged bases

4JGN|1|E|U|502||||4_555

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4JGN|1|E|C|520
4JGN|1|E|U|521
4JGN|1|E|U|502||||4_555
4JGN|1|E|U|503||||4_555
4JGN|1|E|G|504||||4_555

Current chains

Chain E

5'-R(P*UP*UP*GP*CP*UP*GP*CP*UP*GP*CP*UP*GP*CP*UP*GP*CP*UP*GP*CP*U)-3'

Nearby chains

Chain A

RNA silencing suppressor p19