HL_4JV5_019
3D structure
- PDB id
- 4JV5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structures of pseudouridinilated stop codons with ASLs
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.16 Å
Loop
- Sequence
- CUAACG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4JV5_019 not in the Motif Atlas
- Homologous match to HL_4LFB_019
- Geometric discrepancy: 0.1088
- The information below is about HL_4LFB_019
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.8
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 352
Unit IDs
4JV5|1|A|C|862
4JV5|1|A|U|863
4JV5|1|A|A|864
4JV5|1|A|A|865
4JV5|1|A|C|866
4JV5|1|A|G|867
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain E
- 30S ribosomal protein S5
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