HL_4KR6_004

3D structure

PDB id

4KR6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a 4-thiouridine synthetase - RNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

2.85 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

4KR6|1|D|A|21, 4KR6|1|D|A|23

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4KR6_004 not in the Motif Atlas

Geometric match to HL_2ZNI_001

Geometric discrepancy: 0.3625

The information below is about HL_2ZNI_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

4KR6|1|D|G|19
4KR6|1|D|G|20
4KR6|1|D|A|21
4KR6|1|D|A|22
4KR6|1|D|A|23
4KR6|1|D|C|24

Current chains

Chain D

RNA (39-MER)

Nearby chains