HL_4KZX_005

3D structure

PDB id

4KZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 40S ribosomal subunit in complex with eIF1.

Experimental method

X-RAY DIFFRACTION

Resolution

7.81 Å

Loop

Sequence

CAGCCUCCCCGCCGGCCGGGGGGGUGGGGC*G

Length

31 nucleotides

Bulged bases

4KZX|1|i|C|243, 4KZX|1|i|C|244, 4KZX|1|i|U|245, 4KZX|1|i|C|246, 4KZX|1|i|C|247, 4KZX|1|i|C|248, 4KZX|1|i|C|249, 4KZX|1|i|G|250, 4KZX|1|i|C|251, 4KZX|1|i|C|252, 4KZX|1|i|G|253, 4KZX|1|i|G|254, 4KZX|1|i|C|255, 4KZX|1|i|C|256, 4KZX|1|i|G|257, 4KZX|1|i|G|258, 4KZX|1|i|G|259, 4KZX|1|i|G|260, 4KZX|1|i|G|261, 4KZX|1|i|G|262, 4KZX|1|i|G|263, 4KZX|1|i|U|264, 4KZX|1|i|G|265, 4KZX|1|i|G|266, 4KZX|1|i|G|267, 4KZX|1|i|G|268, 4KZX|1|i|C|269

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4KZX|1|i|C|240
4KZX|1|i|A|241
4KZX|1|i|G|270
4KZX|1|i|C|243
4KZX|1|i|C|244
4KZX|1|i|U|245
4KZX|1|i|C|246
4KZX|1|i|C|247
4KZX|1|i|C|248
4KZX|1|i|C|249
4KZX|1|i|G|250
4KZX|1|i|C|251
4KZX|1|i|C|252
4KZX|1|i|G|253
4KZX|1|i|G|254
4KZX|1|i|C|255
4KZX|1|i|C|256
4KZX|1|i|G|257
4KZX|1|i|G|258
4KZX|1|i|G|259
4KZX|1|i|G|260
4KZX|1|i|G|261
4KZX|1|i|G|262
4KZX|1|i|G|263
4KZX|1|i|U|264
4KZX|1|i|G|265
4KZX|1|i|G|266
4KZX|1|i|G|267
4KZX|1|i|G|268
4KZX|1|i|C|269
*
4KZX|1|i|G|270

Current chains

Chain i

18S ribosomal RNA

Nearby chains