HL_4KZX_017

3D structure

PDB id

4KZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 40S ribosomal subunit in complex with eIF1.

Experimental method

X-RAY DIFFRACTION

Resolution

7.81 Å

Loop

Sequence

UGUUCAAAG

Length

9 nucleotides

Bulged bases

4KZX|1|i|G|817

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4KZX_017 not in the Motif Atlas

Homologous match to HL_4V88_203

Geometric discrepancy: 0.1868

The information below is about HL_4V88_203

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_47383.2

Basepair signature

cWW-F-F-cWW-F-F

Number of instances in this motif group

11

Unit IDs

4KZX|1|i|U|816
4KZX|1|i|G|817
4KZX|1|i|U|818
4KZX|1|i|U|819
4KZX|1|i|C|820
4KZX|1|i|A|821
4KZX|1|i|A|822
4KZX|1|i|A|823
4KZX|1|i|G|824

Current chains

Chain i

18S ribosomal RNA

Nearby chains

Chain E

40S ribosomal protein S4X

Chain J

40S Ribosomal protein S9

Chain Y

40S ribosomal protein S24