HL_4KZX_031

3D structure

PDB id

4KZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 40S ribosomal subunit in complex with eIF1.

Experimental method

X-RAY DIFFRACTION

Resolution

7.81 Å

Loop

Sequence

CGUUCAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4KZX_031 not in the Motif Atlas

Homologous match to HL_4V88_217

Geometric discrepancy: 0.2802

The information below is about HL_4V88_217

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_67216.9

Basepair signature

cWW-cWW-F-tSH

Number of instances in this motif group

9

Unit IDs

4KZX|1|i|C|1456
4KZX|1|i|G|1457
4KZX|1|i|U|1458
4KZX|1|i|U|1459
4KZX|1|i|C|1460
4KZX|1|i|A|1461
4KZX|1|i|G|1462

Current chains

Chain i

18S ribosomal RNA

Nearby chains

Chain R

40S ribosomal protein S17

Chain c

40S ribosomal protein S28

Chain g

40S ribosomal protein RACK1