HL_4KZY_017

3D structure

PDB id

4KZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 40S ribosomal subunit in complex with eIF1 and eIF1A.

Experimental method

X-RAY DIFFRACTION

Resolution

7.01 Å

Loop

Sequence

CCCGAGCCG

Length

9 nucleotides

Bulged bases

4KZY|1|i|G|832, 4KZY|1|i|C|836

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4KZY_017 not in the Motif Atlas

Homologous match to HL_8P9A_207

Geometric discrepancy: 0.5439

The information below is about HL_8P9A_207

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_89167.1

Basepair signature

cWW-F-F

Number of instances in this motif group

20

Unit IDs

4KZY|1|i|C|829
4KZY|1|i|C|830
4KZY|1|i|C|831
4KZY|1|i|G|832
4KZY|1|i|A|833
4KZY|1|i|G|834
4KZY|1|i|C|835
4KZY|1|i|C|836
4KZY|1|i|G|837

Current chains

Chain i

18S Ribosomal RNA

Nearby chains

Chain E

40S Ribosomal Protein S4X

Chain J

40S Ribosomal Protein S9

Chain Y

40S Ribosomal Protein S24