HL_4KZY_027

3D structure

PDB id

4KZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 40S ribosomal subunit in complex with eIF1 and eIF1A.

Experimental method

X-RAY DIFFRACTION

Resolution

7.01 Å

Loop

Sequence

AGCGAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4KZY_027 not in the Motif Atlas

Homologous match to HL_4V88_214

Geometric discrepancy: 0.1222

The information below is about HL_4V88_214

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

4KZY|1|i|A|1349
4KZY|1|i|G|1350
4KZY|1|i|C|1351
4KZY|1|i|G|1352
4KZY|1|i|A|1353
4KZY|1|i|U|1354

Current chains

Chain i

18S Ribosomal RNA

Nearby chains

Chain A

40S Ribosomal Protein SA

Chain C

40S Ribosomal Protein S2