HL_4KZZ_014
3D structure
- PDB id
- 4KZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 40S ribosomal subunit in complex with mRNA, initiator tRNA and eIF1A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 7.03 Å
Loop
- Sequence
- ACUUUAAAUCCUU
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4KZZ_014 not in the Motif Atlas
- Geometric match to HL_4V88_199
- Geometric discrepancy: 0.2288
- The information below is about HL_4V88_199
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_05304.1
- Basepair signature
- cWW-cWW-F-F-tSH-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
4KZZ|1|i|A|559
4KZZ|1|i|C|560
4KZZ|1|i|U|561
4KZZ|1|i|U|562
4KZZ|1|i|U|563
4KZZ|1|i|A|564
4KZZ|1|i|A|565
4KZZ|1|i|A|566
4KZZ|1|i|U|567
4KZZ|1|i|C|568
4KZZ|1|i|C|569
4KZZ|1|i|U|570
4KZZ|1|i|U|571
Current chains
- Chain i
- 18S Ribosomal RNA
Nearby chains
- Chain E
- 40S Ribosomal Protein S4X
- Chain J
- 40S Ribosomal Protein S9
- Chain Y
- 40S Ribosomal Protein S24
Coloring options: