HL_4KZZ_031
3D structure
- PDB id
- 4KZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 40S ribosomal subunit in complex with mRNA, initiator tRNA and eIF1A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 7.03 Å
Loop
- Sequence
- CGUUCAG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4KZZ_031 not in the Motif Atlas
- Homologous match to HL_4V88_217
- Geometric discrepancy: 0.2803
- The information below is about HL_4V88_217
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_67216.9
- Basepair signature
- cWW-cWW-F-tSH
- Number of instances in this motif group
- 9
Unit IDs
4KZZ|1|i|C|1456
4KZZ|1|i|G|1457
4KZZ|1|i|U|1458
4KZZ|1|i|U|1459
4KZZ|1|i|C|1460
4KZZ|1|i|A|1461
4KZZ|1|i|G|1462
Current chains
- Chain i
- 18S Ribosomal RNA
Nearby chains
- Chain R
- 40S Ribosomal Protein S17
- Chain a
- 40S Ribosomal Protein S26
- Chain c
- 40S Ribosomal Protein S28
- Chain g
- 40S Ribosomal Protein RACK1
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