HL_4KZZ_034
3D structure
- PDB id
- 4KZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 40S ribosomal subunit in complex with mRNA, initiator tRNA and eIF1A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 7.03 Å
Loop
- Sequence
- GUCAUAAGC
- Length
- 9 nucleotides
- Bulged bases
- 4KZZ|1|i|G|1660
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4KZZ_034 not in the Motif Atlas
- Homologous match to HL_4V88_220
- Geometric discrepancy: 0.1465
- The information below is about HL_4V88_220
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_01927.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
4KZZ|1|i|G|1653
4KZZ|1|i|U|1654
4KZZ|1|i|C|1655
4KZZ|1|i|A|1656
4KZZ|1|i|U|1657
4KZZ|1|i|A|1658
4KZZ|1|i|A|1659
4KZZ|1|i|G|1660
4KZZ|1|i|C|1661
Current chains
- Chain i
- 18S Ribosomal RNA
Nearby chains
- Chain Q
- 40S Ribosomal Protein S16
- Chain T
- 40S Ribosomal Protein S19
- Chain U
- 40S Ribosomal Protein S20
- Chain d
- 40S Ribosomal Protein S29
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