HL_4KZZ_039

3D structure

PDB id

4KZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 40S ribosomal subunit in complex with mRNA, initiator tRNA and eIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

7.03 Å

Loop

Sequence

UCGGCCCACGG

Length

11 nucleotides

Bulged bases

4KZZ|1|i|C|1756, 4KZZ|1|i|G|1757, 4KZZ|1|i|G|1758, 4KZZ|1|i|C|1759, 4KZZ|1|i|C|1760, 4KZZ|1|i|C|1761, 4KZZ|1|i|A|1762, 4KZZ|1|i|C|1763, 4KZZ|1|i|G|1764

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4KZZ|1|i|U|1755
4KZZ|1|i|C|1756
4KZZ|1|i|G|1757
4KZZ|1|i|G|1758
4KZZ|1|i|C|1759
4KZZ|1|i|C|1760
4KZZ|1|i|C|1761
4KZZ|1|i|A|1762
4KZZ|1|i|C|1763
4KZZ|1|i|G|1764
4KZZ|1|i|G|1765

Current chains

Chain i

18S Ribosomal RNA

Nearby chains