HL_4L47_150

3D structure

PDB id

4L47 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

4L47|1|YA|A|196

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4L47_150 not in the Motif Atlas

Geometric match to HL_5J7L_139

Geometric discrepancy: 0.0694

The information below is about HL_5J7L_139

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_30068.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

4L47|1|YA|G|194
4L47|1|YA|A|195
4L47|1|YA|A|196
4L47|1|YA|A|197
4L47|1|YA|C|198
4L47|1|YA|A|199
4L47|1|YA|U|200
4L47|1|YA|C|201

Current chains

Chain YA

23S rRNA

Nearby chains

Chain Y1

50S ribosomal protein L28

Chain YP

50S ribosomal protein L15