HL_4L71_115

3D structure

PDB id

4L71 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.9 Å

Loop

Sequence

UGAGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4L71_115 not in the Motif Atlas

Homologous match to HL_4LFB_007

Geometric discrepancy: 0.1125

The information below is about HL_4LFB_007

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

4L71|1|XA|U|296
4L71|1|XA|G|297
4L71|1|XA|A|298
4L71|1|XA|G|299
4L71|1|XA|A|300
4L71|1|XA|G|301

Current chains

Chain XA

16S Ribosomal RNA

Nearby chains

Chain XD

30S ribosomal protein S4

Chain XE

30S ribosomal protein S5

Chain XL

30S ribosomal protein S12

Chain XQ

30S ribosomal protein S17