3D structure

PDB id
4L71 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.9 Å

Loop

Sequence
GUUCGUGGAGC
Length
11 nucleotides
Bulged bases
4L71|1|YA|G|386
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4L71_157 not in the Motif Atlas
Homologous match to HL_7RQB_013
Geometric discrepancy: 0.1135
The information below is about HL_7RQB_013
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_91503.4
Basepair signature
cWW-F-F-F-F-F-F-F
Number of instances in this motif group
4

Unit IDs

4L71|1|YA|G|382
4L71|1|YA|U|383
4L71|1|YA|U|384
4L71|1|YA|C|385
4L71|1|YA|G|386
4L71|1|YA|U|387
4L71|1|YA|G|388
4L71|1|YA|G|389
4L71|1|YA|A|390
4L71|1|YA|G|391
4L71|1|YA|C|392

Current chains

Chain YA
23S Ribosomal RNA

Nearby chains

Chain Y1
50S ribosomal protein L28
Chain YP
50S ribosomal protein L15

Coloring options:


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