3D structure

PDB id
4LEL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.9 Å

Loop

Sequence
GGCGAC
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4LEL_108 not in the Motif Atlas
Homologous match to HL_7RQB_071
Geometric discrepancy: 0.1819
The information below is about HL_7RQB_071
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_35490.2
Basepair signature
cWW-tSH-F-F
Number of instances in this motif group
299

Unit IDs

4LEL|1|RB|G|86
4LEL|1|RB|G|87
4LEL|1|RB|C|88
4LEL|1|RB|G|89
4LEL|1|RB|A|89|||A
4LEL|1|RB|C|90

Current chains

Chain RB
5S rRNA

Nearby chains

Chain RA
Large subunit ribosomal RNA; LSU rRNA
Chain RQ
50S ribosomal protein L16
Chain RZ
50S ribosomal protein L25

Coloring options:


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