HL_4LEL_116

3D structure

PDB id

4LEL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.9 Å

Loop

Sequence

CACUGAGACACGGG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4LEL_116 not in the Motif Atlas

Homologous match to HL_4LFB_008

Geometric discrepancy: 0.1347

The information below is about HL_4LFB_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81205.3

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

4LEL|1|XA|C|320
4LEL|1|XA|A|321
4LEL|1|XA|C|322
4LEL|1|XA|U|323
4LEL|1|XA|G|324
4LEL|1|XA|A|325
4LEL|1|XA|G|326
4LEL|1|XA|A|327
4LEL|1|XA|C|328
4LEL|1|XA|A|329
4LEL|1|XA|C|330
4LEL|1|XA|G|331
4LEL|1|XA|G|332
4LEL|1|XA|G|333

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XP

30S ribosomal protein S16

Chain XT

30S ribosomal protein S20