HL_4LF6_032

3D structure

PDB id

4LF6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of 30S ribosomal subunit from Thermus thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.31 Å

Loop

Sequence

CGGAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4LF6_032 not in the Motif Atlas

Geometric match to HL_5U3G_001

Geometric discrepancy: 0.1618

The information below is about HL_5U3G_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

4LF6|1|A|C|1515
4LF6|1|A|G|1516
4LF6|1|A|G|1517
4LF6|1|A|A|1518
4LF6|1|A|A|1519
4LF6|1|A|G|1520

Current chains

Chain A

16S rRNA

Nearby chains