HL_4LFB_025

3D structure

PDB id

4LFB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of 30S ribosomal subunit from Thermus thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.01 Å

Loop

Sequence

GUUAAGUC

Length

8 nucleotides

Bulged bases

4LFB|1|A|G|1094

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

T-loop related

Broad Annotation

T-loop

Motif group

HL_63894.2

Basepair signature

cWW-cWW-F-F-F

Number of instances in this motif group

19

Unit IDs

4LFB|1|A|G|1089
4LFB|1|A|U|1090
4LFB|1|A|U|1091
4LFB|1|A|A|1092
4LFB|1|A|A|1093
4LFB|1|A|G|1094
4LFB|1|A|U|1095
4LFB|1|A|C|1096

Current chains

Chain A

16S rRNA

Nearby chains

Chain B

ribosomal protein S2

Chain G

ribosomal protein S7