3D structure

PDB id
4LFB (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
Experimental method
X-RAY DIFFRACTION
Resolution
3.01 Å

Loop

Sequence
GUUAAGUC
Length
8 nucleotides
Bulged bases
4LFB|1|A|G|1094
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_77436.2
Basepair signature
cWW-F-F-F-F-F
Number of instances in this motif group
23

Unit IDs

4LFB|1|A|G|1089
4LFB|1|A|U|1090
4LFB|1|A|U|1091
4LFB|1|A|A|1092
4LFB|1|A|A|1093
4LFB|1|A|G|1094
4LFB|1|A|U|1095
4LFB|1|A|C|1096

Current chains

Chain A
16S rRNA

Nearby chains

Chain B
ribosomal protein S2
Chain G
ribosomal protein S7

Coloring options:

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