3D structure

PDB id
4LFB (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
Experimental method
X-RAY DIFFRACTION
Resolution
3.01 Å

Loop

Sequence
GGCAAC
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
Other HL
Broad Annotation
Other HL
Motif group
HL_85603.1
Basepair signature
cWW-tSH-F-F
Number of instances in this motif group
304

Unit IDs

4LFB|1|A|G|1265
4LFB|1|A|G|1266
4LFB|1|A|C|1267
4LFB|1|A|A|1268
4LFB|1|A|A|1269
4LFB|1|A|C|1270

Current chains

Chain A
16S rRNA

Nearby chains

Chain M
ribosomal protein S13
Chain U
ribosomal protein THX

Coloring options:

Copyright 2024 BGSU RNA group. Page generated in 0.0613 s