3D structure

PDB id
4LFC (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
Experimental method
X-RAY DIFFRACTION
Resolution
3.6 Å

Loop

Sequence
CUUCGG
Length
6 nucleotides
Bulged bases
4LFC|1|A|U|421
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4LFC_011 not in the Motif Atlas
Homologous match to HL_4LFB_011
Geometric discrepancy: 0.101
The information below is about HL_4LFB_011
Detailed Annotation
UNCG
Broad Annotation
No text annotation
Motif group
HL_34617.5
Basepair signature
cWW-tSW-F
Number of instances in this motif group
57

Unit IDs

4LFC|1|A|C|419
4LFC|1|A|U|420
4LFC|1|A|U|421
4LFC|1|A|C|422
4LFC|1|A|G|423
4LFC|1|A|G|424

Current chains

Chain A
16S rRNA

Nearby chains

Chain C
ribosomal protein S3
Chain D
ribosomal protein S4

Coloring options:


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