3D structure

PDB id
4LFC (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
Experimental method
X-RAY DIFFRACTION
Resolution
3.6 Å

Loop

Sequence
CUACGG
Length
6 nucleotides
Bulged bases
4LFC|1|A|A|1451
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4LFC_031 not in the Motif Atlas
Homologous match to HL_4LFB_031
Geometric discrepancy: 0.0769
The information below is about HL_4LFB_031
Detailed Annotation
UNCG
Broad Annotation
No text annotation
Motif group
HL_34617.5
Basepair signature
cWW-tSW-F
Number of instances in this motif group
57

Unit IDs

4LFC|1|A|C|1449
4LFC|1|A|U|1450
4LFC|1|A|A|1451
4LFC|1|A|C|1452
4LFC|1|A|G|1453
4LFC|1|A|G|1454

Current chains

Chain A
16S rRNA

Nearby chains

Chain T
ribosomal protein S20

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.0769 s