HL_4LFZ_012

3D structure

PDB id

4LFZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of Paromomycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.92 Å

Loop

Sequence

CGACGAG

Length

7 nucleotides

Bulged bases

4LFZ|1|QA|C|466

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4LFZ_012 not in the Motif Atlas

Homologous match to HL_4LFB_012

Geometric discrepancy: 0.2933

The information below is about HL_4LFB_012

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

4LFZ|1|QA|C|458
4LFZ|1|QA|G|464
4LFZ|1|QA|A|465
4LFZ|1|QA|C|466
4LFZ|1|QA|G|467
4LFZ|1|QA|A|468
4LFZ|1|QA|G|474

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QP

30S ribosomal protein S16