HL_4LFZ_061

3D structure

PDB id

4LFZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of Paromomycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.92 Å

Loop

Sequence

CUUUAGGG

Length

8 nucleotides

Bulged bases

4LFZ|1|RA|U|827, 4LFZ|1|RA|G|830

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4LFZ_061 not in the Motif Atlas

Geometric match to HL_2ZZM_002

Geometric discrepancy: 0.3854

The information below is about HL_2ZZM_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.3

Basepair signature

cWW-F-F

Number of instances in this motif group

4

Unit IDs

4LFZ|1|RA|C|825
4LFZ|1|RA|U|826
4LFZ|1|RA|U|827
4LFZ|1|RA|U|828
4LFZ|1|RA|A|829
4LFZ|1|RA|G|830
4LFZ|1|RA|G|831
4LFZ|1|RA|G|832

Current chains

Chain RA

23S rRNA

Nearby chains

Chain R0

50S ribosomal protein L27

Chain RP

50S ribosomal protein L15