HL_4LFZ_065

3D structure

PDB id

4LFZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of Paromomycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.92 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

4LFZ|1|RA|U|1066, 4LFZ|1|RA|A|1070

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4LFZ_065 not in the Motif Atlas

Homologous match to HL_5J7L_161

Geometric discrepancy: 0.4335

The information below is about HL_5J7L_161

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19210.3

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

4LFZ|1|RA|C|1064
4LFZ|1|RA|U|1065
4LFZ|1|RA|U|1066
4LFZ|1|RA|A|1067
4LFZ|1|RA|G|1068
4LFZ|1|RA|A|1069
4LFZ|1|RA|A|1070
4LFZ|1|RA|G|1071
4LFZ|1|RA|C|1072
4LFZ|1|RA|A|1073
4LFZ|1|RA|G|1074

Current chains

Chain RA

23S rRNA

Nearby chains