HL_4LFZ_121

3D structure

PDB id

4LFZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of Paromomycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.92 Å

Loop

Sequence

CAGCCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4LFZ_121 not in the Motif Atlas

Geometric match to HL_7RQB_011

Geometric discrepancy: 0.2292

The information below is about HL_7RQB_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_70546.1

Basepair signature

cWW-F

Number of instances in this motif group

18

Unit IDs

4LFZ|1|XA|C|522
4LFZ|1|XA|A|523
4LFZ|1|XA|G|524
4LFZ|1|XA|C|525
4LFZ|1|XA|C|526
4LFZ|1|XA|G|527

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XL

30S ribosomal protein S12

Chain XX

A-site ASL SufA6