HL_4LFZ_225
3D structure
- PDB id
- 4LFZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of Paromomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.92 Å
Loop
- Sequence
- CCAUGGACGAG
- Length
- 11 nucleotides
- Bulged bases
- 4LFZ|1|RA|A|1453, 4LFZ|1|RA|U|1454, 4LFZ|1|RA|A|1460
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4LFZ_225 not in the Motif Atlas
- Geometric match to HL_5J7L_200
- Geometric discrepancy: 0.2815
- The information below is about HL_5J7L_200
- Detailed Annotation
- UNCG variation
- Broad Annotation
- UNCG variation
- Motif group
- HL_08100.1
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
4LFZ|1|RA|C|1450
4LFZ|1|RA|C|1451
4LFZ|1|RA|A|1453
4LFZ|1|RA|U|1454
4LFZ|1|RA|G|1455
4LFZ|1|RA|G|1456
4LFZ|1|RA|A|1457
4LFZ|1|RA|C|1458
4LFZ|1|RA|G|1459
4LFZ|1|RA|A|1460
4LFZ|1|RA|G|1461
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain RR
- 50S ribosomal protein L17
Coloring options: