HL_4LGT_001

3D structure

PDB id

4LGT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the catalytic domain of RluB in complex with a 21-nucleotide RNA substrate

Experimental method

X-RAY DIFFRACTION

Resolution

1.3 Å

Loop

Sequence

CGUGAG

Length

6 nucleotides

Bulged bases (A, C, G, U)

2596U

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_29960.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

59

Unit IDs

4LGT|1|E|C|2594
4LGT|1|E|G|2595
4LGT|1|E|U|2596
4LGT|1|E|G|2597
4LGT|1|E|A|2598
4LGT|1|E|G|2599

Current chains

Chain E

stem-loop of 23S rRNA

Nearby chains

Chain A

Ribosomal large subunit pseudouridine synthase B