3D structure

PDB id
4LNT (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
2.94 Å

Loop

Sequence
CGGAAG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4LNT_032 not in the Motif Atlas
Homologous match to HL_6CZR_103
Geometric discrepancy: 0.0923
The information below is about HL_6CZR_103
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_37824.6
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
360

Unit IDs

4LNT|1|QA|C|1515
4LNT|1|QA|G|1516
4LNT|1|QA|G|1517
4LNT|1|QA|A|1518
4LNT|1|QA|A|1519
4LNT|1|QA|G|1520

Current chains

Chain QA
16S rRNA

Nearby chains

Chain RA
Large subunit ribosomal RNA; LSU rRNA

Coloring options:


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