HL_4LNT_036
3D structure
- PDB id
- 4LNT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.94 Å
Loop
- Sequence
- GUUCGG(1MG)AC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: 1MG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4LNT_036 not in the Motif Atlas
- Geometric match to HL_3TUP_002
- Geometric discrepancy: 0.1636
- The information below is about HL_3TUP_002
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.5
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 50
Unit IDs
4LNT|1|QY|G|31
4LNT|1|QY|U|32
4LNT|1|QY|U|33
4LNT|1|QY|C|34
4LNT|1|QY|G|35
4LNT|1|QY|G|36
4LNT|1|QY|1MG|37
4LNT|1|QY|A|38
4LNT|1|QY|C|39
Current chains
- Chain QY
- messenger RNA
Nearby chains
- Chain QA
- Small subunit ribosomal RNA; SSU rRNA
- Chain QL
- 30S ribosomal protein S12
- Chain QM
- 30S ribosomal protein S13
- Chain QX
- A-site ASL SufA6
- Chain RA
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: